Rubinisphaera - Misplaced Pages

Genus of bacteria

Rubinisphaera
Scientific classification
Domain:	Bacteria
Phylum:	Planctomycetota
Class:	Planctomycetia
Order:	Planctomycetales
Family:	Planctomycetaceae
Genus:	Rubinisphaera Scheuner et al. 2015
Type species
Rubinisphaera brasiliensis (Schlesner 1990) Scheuner et al. 2015
Species
R. brasiliensis R. italica R. margarita

Rubinisphaera is a genus of bacteria from the family of Planctomycetaceae with two known species. Rubinisphaera brasiliensis has been isolated from water from the Lagoa Vermelha from Brazil.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI)

16S rRNA based LTP_10_2024

120 marker proteins based GTDB 09-RS220

Rubinisphaera

R. brasiliensis

	R. italica

	R. margarita

Rubinisphaera

R. brasiliensis (Schlesner 1990) Scheuner et al. 2015

	R. italica Kallscheuer et al. 2021

	R. margarita Vitorino et al. 2022

References

^ Parte, A.C. "Rubinisphaera". LPSN.
"Rubinisphaera". www.uniprot.org.
"Details: DSM-5305". www.dsmz.de.
Scheuner, C; Tindall, BJ; Lu, M; Nolan, M; Lapidus, A; Cheng, JF; Goodwin, L; Pitluck, S; Huntemann, M; Liolios, K; Pagani, I; Mavromatis, K; Ivanova, N; Pati, A; Chen, A; Palaniappan, K; Jeffries, CD; Hauser, L; Land, M; Mwirichia, R; Rohde, M; Abt, B; Detter, JC; Woyke, T; Eisen, JA; Markowitz, V; Hugenholtz, P; Göker, M; Kyrpides, NC; Klenk, HP (2014). "Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305(T)), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae". Standards in Genomic Sciences. 9: 10. doi:10.1186/1944-3277-9-10. PMC 4334474. PMID 25780503.
A.C. Parte; et al. "Rubinisphaera". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
Sayers; et al. "Rubinisphaera". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
"The LTP". Retrieved 10 December 2024.
"LTP_all tree in newick format". Retrieved 10 December 2024.
"LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
"GTDB release 09-RS220". Genome Taxonomy Database. Retrieved 10 May 2024.
"bac120_r220.sp_labels". Genome Taxonomy Database. Retrieved 10 May 2024.
"Taxon History". Genome Taxonomy Database. Retrieved 10 May 2024.

Prokaryotes: Bacteria classification

(major groups

Terrabacteria
BV1, BV3, BV5

others	Actinomycetota Acidimicrobiia Actinomycetia "Aquicultoria" Coriobacteriia "Geothermincolia" "Humimicrobiia" Nitriliruptoria Rubrobacteria Thermoleophilia Armatimonadota "Abditibacteriia" Armatimonadia Chthonomonadia Fimbriimonadia "Heboniibacteriia" "Zipacnadia" "Bipolaricaulota" "Bipolaricaulia" Chloroflexota "Caldilineia" Chloroflexia Dehalococcoidia Ktedonobacteria "Limnocylindria" Deinococcota "Deinococcia" "Dormiibacterota" "Dormibacteria" "Sysuimicrobiota" "Sysuimicrobiia" Vulcanimicrobiota "Eudoremicrobiia" Vulcanimicrobiia "Xenobiia"
Cyanoprokaryota	Cyanobacteriota Cyanobacteria "Sericytochromatia" "Vampirovibrionophyceae" "Margulisiibacteriota" "Marinamargulisbacteria" "Riflemargulisbacteria" "Saganbacteria" "Termititenacia"
Firmicutes BV3 Low GC	Bacillota "Bacillia" Bacillota A "Clostridiia" "Thermoanaerobacteria" Thermosediminibacteria Bacillota D "Dethiobacteria" Natranaerobiia "Proteinivoracia" Bacillota E Sulfobacillia Symbiobacteriia Thermaerobacteria Bacillota G "Hydrogenisporia" Limnochordia "Desulfotomaculota" "Carboxydocellia" "Carboxydothermia" "Dehalobacteriia" Desulfitobacteriia Desulfotomaculia "Moorellia" Peptococcia Syntrophomonadia Thermincolia "Halanaerobiaeota" "Halanaerobiia" "Selenobacteria" "Selenomonadia"

CPR group

"Elulota"
- "Elulimicrobia"
"Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"

Thermotogida

Synergistetes	Atribacterota Atribacteria "Phoenicimicrobiia" Synergistota Synergistia
Thermocalda	Caldisericota Caldisericia Coprothermobacterota Coprothermobacteria Dictyoglomerota Dictyoglomeria "Lithacetigenota" "Lithacetigenia" "Thermodesulfobiota" "Thermodesulfobiia" Thermotogota "Thermotogia" "Zhurongbacterota"

Fusobacterida

Fusobacteriota
- Fusobacteriia
"Macinerneyibacteriota"
- "Macinerneyibacteriia"
"Muiribacteriota"
- "Muiribacteriia"
"Rifleibacteriota"
- "Ozemibacteria"
"Walliibacteriota"

Hydrobacteria
BV2, BV4

Clade 1

"Aerophobota"
- "Aerophobia"
"Auribacterota"
- "Ancaeobacteria"
- "Auribacteria"
- "Erginobacteria"
- "Tritonobacteria"
"Desantisiibacteriota"
Elusimicrobiota
- Elusimicrobiia
- Endomicrobiia
"Firestoneibacteriota"
"Goldiibacteriota"
"Omnitrophota"
- "Omnitrophia"
- "Velamenicoccia"
"Ratteibacteriota"

Spirochaeto
bacteriobiontes

"Babelota"
- "Babeliae"
"Lindowiibacteriota"
Spirochaetota
- "Brevinematia"
- "Brachyspirae"
- "Exilispiria"
- "Leptospiria"
- Spirochaetia

PVC group
(Planctobacteria)

"Abyssubacteria"
Chlamydiota
- Chlamydiia
"Coatesiibacteriota"
"Hinthialibacterota"
- "Hinthialibacteria"
"Hydrogenedentota"
- "Hydrogenedentia"
Fidelibacterota
- Fidelibacteria
Planctomycetota
- "Brocadiia"
- "Phycisphaeria"
- Planctomycetia
- "Uabimicrobiia"
"Poribacteriota"
"Saltatorellota"
- "Saltatorellae"
"Sumerlaeota"
- "Sumerlaeia"
Verrucomicrobiota
- Kiritimatiellia
- Lentisphaeria
- Verrucomicrobiia

FCB group
(Sphingobacteria)

Bacteroidota
- Bacteroidia
- Chlorobiia
- "Ignavibacteriia"
- "Kapaibacteria"
- "Kryptoniia"
- Rhodothermia
Calditrichota
- Calditrichia
"Cloacimonadota"
- "Cloacimonadia"
"Cosmopoliota"
- "Cosmopolitia"
"Delongiibacteriota"
"Edwardsiibacteriota"
"Effluvivivacota"
"Eiseniibacteriota"
"Electryoneota"
- "Electryoneia"
- "Tariuqbacteria"
"Fermentibacterota"
- "Fermentibacteria"
Fibrobacterota
- Chitinivibrionia
- Fibrobacteria
- "Raymondbacteriia"
Gemmatimonadota
- Gemmatimonadia
- "Glassbacteria"
"Heilongiota"
- "Heilongiia"
"Hydrothermota"
- "Hydrothermia"
- "Stahlbacteria"
"Krumholzibacteriota"
- "Krumholzibacteriia"
"Latescibacterota"
- "Handelsmanbacteria"
- "Latescibacteria"
"Marinisomatota"
- "Marinisomatia"
"Tianyaibacteriota"
"Zixiibacteriota"

Proteobacteria
BV2

Aquificida	"Acidulidesulfobacteriota" "Acidulodesulfobacteriia" Aquificota Aquificia Desulfurobacteriia Campylobacterota "Campylobacteria" Desulfurellia "Calescibacteriota" "Calescibacteriia" Chrysiogenota Chrysiogenia "Dadaibacteriota" "Dadabacteria" Deferribacterota "Deferribacteria" Desulfobacterota G Syntrophorhabdia Thermosulfidibacterota Thermosulfidibacteria
Deltaproteobacteria	Bdellovibrionota Bacteriovoracia Bdellovibrionia Oligoflexia "Binatota" "Binatia" "Deferrimicrobiota" "Deferrimicrobiia" "Deferrisomatota" Deferrisomatia "Desulfuromonadota" Desulfuromonadia "Lernaellota" "Lernaellia" "Methylomirabilota" "Methylomirabilia" "Moduliflexota" "Moduliflexia" Myxococcota Myxococcia "Bradymonadia" Polyangiia Nitrospinota Nitrospinia Nitrospirota Nitrospiria Thermodesulfovibrionia SAR324 "Lambdaproteobacteria" "Schekmaniibacteriota" "Tectimicrobiota" "Entotheonellia" "Thermodesulfobacteriota"
others	Acidobacteriota "Acidobacteriia" "Aminicenantia" Blastocatellia "Fischerbacteria" "Guanabaribacteriia" "Holophagia" "Polarisedimenticolia" Thermoanaerobaculia Vicinamibacteria "Canglongiota" "Canglongiia" "Leptospirillaeota" "Leptospirillia" Pseudomonadota "Caulobacteria" "Mariprofundia" Magnetococcia "Pseudomonadia"

others

Source: Bergey's Manual (2001–2012)
Alternative views: Wikispecies

Taxon identifiers
Rubinisphaera	Wikidata: Q26282693 Wikispecies: Rubinisphaera GBIF: 7698749 IRMNG: 11908660 LPSN: rubinisphaera.html NCBI: 1649490

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Categories:

Phylogeny

See also

References