Misplaced Pages

PDE6G

Article snapshot taken from[REDACTED] with creative commons attribution-sharealike license. Give it a read and then ask your questions in the chat. We can research this topic together.
Protein-coding gene in the species Homo sapiens
PDE6G
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

3JWR

Identifiers
AliasesPDE6G, PDEG, RP57, phosphodiesterase 6G
External IDsOMIM: 180073; MGI: 97526; HomoloGene: 1955; GeneCards: PDE6G; OMA:PDE6G - orthologs
Gene location (Human)
Chromosome 17 (human)
Chr.Chromosome 17 (human)
Chromosome 17 (human)Genomic location for PDE6GGenomic location for PDE6G
Band17q25.3Start81,650,459 bp
End81,663,112 bp
Gene location (Mouse)
Chromosome 11 (mouse)
Chr.Chromosome 11 (mouse)
Chromosome 11 (mouse)Genomic location for PDE6GGenomic location for PDE6G
Band11 E2|11 84.14 cMStart120,338,431 bp
End120,344,326 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • testicle

  • gonad

  • granulocyte

  • lymph node

  • spleen

  • retinal pigment epithelium

  • monocyte

  • secondary oocyte

  • blood

  • bone marrow cells
Top expressed in
  • neural layer of retina

  • epithelium of lens

  • pineal gland

  • retinal pigment epithelium

  • corneal stroma

  • gastrula

  • iris

  • outer nuclear layer

  • right ventricle

  • ciliary body
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

5148

18588

Ensembl

ENSG00000185527

ENSMUSG00000025386

UniProt

P18545

P09174

RefSeq (mRNA)

NM_002602
NM_001365724
NM_001365725

NM_012065

RefSeq (protein)

NP_002593
NP_001352653
NP_001352654

NP_036197

Location (UCSC)Chr 17: 81.65 – 81.66 MbChr 11: 120.34 – 120.34 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma is an enzyme that in humans is encoded by the PDE6G gene.

Interactions

PDE6G has been shown to interact with Beta adrenergic receptor kinase and Src.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000185527Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000025386Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Pittler SJ, Baehr W, Wasmuth JJ, McConnell DG, Champagne MS, vanTuinen P, Ledbetter D, Davis RL (February 1990). "Molecular characterization of human and bovine rod photoreceptor cGMP phosphodiesterase alpha-subunit and chromosomal localization of the human gene". Genomics. 6 (2): 272–83. doi:10.1016/0888-7543(90)90567-E. PMID 2155175.
  6. "Entrez Gene: PDE6G phosphodiesterase 6G, cGMP-specific, rod, gamma".
  7. Gulati S, Palczewski K, Engel A, Stahlberg H, Kovacik L (February 2019). "Cryo-EM structure of phosphodiesterase 6 reveals insights into the allosteric regulation of type I phosphodiesterases". Science Advances. 5 (2): eaav4322. Bibcode:2019SciA....5.4322G. doi:10.1126/sciadv.aav4322. PMC 6392808. PMID 30820458.
  8. ^ Wan KF, Sambi BS, Tate R, Waters C, Pyne NJ (May 2003). "The inhibitory gamma subunit of the type 6 retinal cGMP phosphodiesterase functions to link c-Src and G-protein-coupled receptor kinase 2 in a signaling unit that regulates p42/p44 mitogen-activated protein kinase by epidermal growth factor". The Journal of Biological Chemistry. 278 (20): 18658–63. doi:10.1074/jbc.M212103200. PMID 12624098. S2CID 25824189.

Further reading

External links

PDB gallery
  • 1fqj: CRYSTAL STRUCTURE OF THE HETEROTRIMERIC COMPLEX OF THE RGS DOMAIN OF RGS9, THE GAMMA SUBUNIT OF PHOSPHODIESTERASE AND THE GT/I1 CHIMERA ALPHA SUBUNIT 1fqj: CRYSTAL STRUCTURE OF THE HETEROTRIMERIC COMPLEX OF THE RGS DOMAIN OF RGS9, THE GAMMA SUBUNIT OF PHOSPHODIESTERASE AND THE GT/I1 CHIMERA ALPHA SUBUNIT
Stub icon

This article on a gene on human chromosome 17 is a stub. You can help Misplaced Pages by expanding it.

Categories:
PDE6G Add topic