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LTBP1 (gene)

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Protein-coding gene in the species Homo sapiens
LTBP1
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1KSQ

Identifiers
AliasesLTBP1, latent transforming growth factor beta binding protein 1
External IDsOMIM: 150390; MGI: 109151; HomoloGene: 522; GeneCards: LTBP1; OMA:LTBP1 - orthologs
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)
Chromosome 2 (human)Genomic location for LTBP1Genomic location for LTBP1
Band2p22.3Start32,946,953 bp
End33,399,509 bp
Gene location (Mouse)
Chromosome 17 (mouse)
Chr.Chromosome 17 (mouse)
Chromosome 17 (mouse)Genomic location for LTBP1Genomic location for LTBP1
Band17|17 E2Start75,312,563 bp
End75,699,507 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right coronary artery

  • Descending thoracic aorta

  • ascending aorta

  • saphenous vein

  • stromal cell of endometrium

  • urethra

  • popliteal artery

  • tibial arteries

  • ventricular zone

  • left coronary artery
Top expressed in
  • ascending aorta

  • cumulus cell

  • tunica media of zone of aorta

  • aortic valve

  • ciliary body

  • umbilical cord

  • efferent ductule

  • atrium

  • blood

  • human fetus
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

4052

268977

Ensembl

ENSG00000049323

ENSMUSG00000001870

UniProt

Q14766

Q8CG19

RefSeq (mRNA)

NM_000627
NM_001166264
NM_001166265
NM_001166266
NM_206943

NM_019919
NM_206958
NM_001331233
NM_001331234
NM_001331235

NM_001331236
NM_001331237

RefSeq (protein)

NP_000618
NP_001159736
NP_001159737
NP_001159738
NP_996826

NP_001318162
NP_001318163
NP_001318164
NP_001318165
NP_001318166

NP_064303
NP_996841

Location (UCSC)Chr 2: 32.95 – 33.4 MbChr 17: 75.31 – 75.7 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Latent-transforming growth factor beta-binding protein 1 is a protein that in humans is encoded by the LTBP1 gene.

The protein encoded by this gene belongs to the family of latent TGF-beta binding proteins (LTBPs). The secretion and activation of TGF-betas is regulated by their association with latency-associated proteins and with latent TGF-beta binding proteins. The product of this gene targets latent complexes of transforming growth factor beta to the extracellular matrix, where the latent cytokine is subsequently activated by several different mechanisms. Alternatively spliced transcript variants encoding different isoforms have been identified.

Interactions

LTBP1 (gene) has been shown to interact with TGF beta 1.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000049323Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000001870Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Kanzaki T, Olofsson A, Moren A, Wernstedt C, Hellman U, Miyazono K, Claesson-Welsh L, Heldin CH (July 1990). "TGF-beta 1 binding protein: a component of the large latent complex of TGF-beta 1 with multiple repeat sequences". Cell. 61 (6): 1051–1061. doi:10.1016/0092-8674(90)90069-Q. PMID 2350783. S2CID 54376541.
  6. Oklu R, Hesketh R (January 2001). "The latent transforming growth factor beta binding protein (LTBP) family". Biochem J. 352 (3): 601–10. doi:10.1042/0264-6021:3520601. PMC 1221494. PMID 11104663.
  7. ^ "Entrez Gene: LTBP1 latent transforming growth factor beta binding protein 1".
  8. Saharinen, J; Keski-Oja J (August 2000). "Specific sequence motif of 8-Cys repeats of TGF-beta binding proteins, LTBPs, creates a hydrophobic interaction surface for binding of small latent TGF-beta". Mol. Biol. Cell. 11 (8): 2691–704. doi:10.1091/mbc.11.8.2691. ISSN 1059-1524. PMC 14949. PMID 10930463.

Further reading

PDB gallery
  • 1ksq: NMR Study of the Third TB Domain from Latent Transforming Growth Factor-beta Binding Protein-1 1ksq: NMR Study of the Third TB Domain from Latent Transforming Growth Factor-beta Binding Protein-1
TGFβ receptor superfamily modulators
Type I
ALK1 (ACVRL1)
ALK2 (ACVR1A)
ALK3 (BMPR1A)
ALK4 (ACVR1B)
ALK5 (TGFβR1)
ALK6 (BMPR1B)
ALK7 (ACVR1C)
Type II
TGFβR2
BMPR2
ACVR2A (ACVR2)
ACVR2B
AMHR2 (AMHR)
Type III
TGFβR3 (β-glycan)
Unsorted
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