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Haplogroup S-M230

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Human Y-chromosome DNA haplogroup
Haplogroup S-M230 (S1a1b)
Possible time of origin28,000-41,000 years before present (Scheinfeldt 2006)
Possible place of originNew Guinea/Indonesia
AncestorS1a1 (Z42413)
DescendantsS1a1b1 (M254)
Defining mutationsM230, P202
Highest frequenciesEkari 74% (Mona 2007)

Haplogroup S-M230, also known as S1a1b (and previously as S* or K2b1a4), is a Y-chromosome DNA haplogroup. It is by far the most numerically significant subclade of Haplogroup S1a (and its sole primary subclade, Haplogroup S-P405).

S-M230 is commonly found among populations of the highlands of Papua New Guinea (Kayser 2003). It is also found at lower frequencies in adjacent parts of Indonesia and Melanesia. (Kayser 2003 Cox 2006)

Origin

This section is empty. You can help by adding to it. (January 2013)

Distribution

One study has reported finding haplogroup S-M230 in: 52% (16/31) of a sample from the Papua New Guinea (PNG) Highlands; 21% (7/34) of a sample from the Moluccas; 16% (5/31) of a sample from the Papua New Guinea coast; 12.5% (2/16) of a sample of Tolai from New Britain; 10% (3/31) of a sample from Nusa Tenggara, and; 2% (2/89) of a sample from the West New Guinea lowlands/coast.(Kayser 2003 Cox 2006)

One subclade, Haplogroup S-M226.1 (S1a1b1d1a; previously S1d) has been found at low frequencies in the Admiralty Islands and along the coast of mainland PNG. (Kayser 2008).

Phylogenetics

Structure & position within Haplogroup S

Main article: Haplogroup S-B254
S1a
  • S1a1 Z42413
    • S1a1a
    • S1a1b M230, P202, P204 – "demoted" in 2016 from its previous position as the basal Haplogroup S* (and known before that as Haplogroup K5)
      • S1a1b1 (M254) (previously known as K2b1a4a)
      • S1a1b1 (M254)
        • S1a1b1a (P57)
        • S1a1b1b (P61)
        • S1a1b1c (P83)
        • S1a1b1d (SK1891)
  • S1a2 P79, P307
  • S1a3 P315
    • S1a3a Z41763
    • S1a3b~ P401
(Based on the 2017 ISOGG tree, the 2015 ISOGG tree,) the 2008 YCC tree (Karafet 2008) and other published research.)

History

Main article: Conversion table for Y chromosome haplogroups

Prior to 2002, there were in academic literature at least seven naming systems for the Y-Chromosome Phylogenetic tree. This led to considerable confusion. In 2002, the major research groups came together and formed the Y-Chromosome Consortium (YCC). They published a joint paper that created a single new tree that all agreed to use. Later, a group of citizen scientists with an interest in population genetics and genetic genealogy formed a working group to create an amateur tree aiming at being above all timely. The table below brings together all of these works at the point of the landmark 2002 YCC Tree. This allows a researcher reviewing older published literature to quickly move between nomenclatures.

YCC 2002/2008 (Shorthand) (α) (β) (γ) (δ) (ε) (ζ) (η) YCC 2002 (Longhand) YCC 2005 (Longhand) YCC 2008 (Longhand) YCC 2010r (Longhand) ISOGG 2006 ISOGG 2007 ISOGG 2008 ISOGG 2009 ISOGG 2010 ISOGG 2011 ISOGG 2012
K-M9 26 VIII 1U 25 Eu16 H5 F K* K K K - - - - - - -

Research publications

The following research teams per their publications were represented in the creation of the YCC tree.

2005 YCC tree

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2008 YCC tree

From 2002 to 2008, it was known as Haplogroup K5.

See also

Genetics

Y-DNA S subclades

  • S-M230

Y-DNA backbone tree

Phylogenetic tree of human Y-chromosome DNA haplogroups
This article needs to be updated. Please help update this article to reflect recent events or newly available information. (February 2021)
"Y-chromosomal Adam"
A00 A0-T 
A0 A1 
A1a A1b
A1b1 BT
B CT
DE CF
D E C F
F1  F-Y27277   F3  GHIJK
G HIJK
IJK H
IJ K
I   J     LT        K2 
I1   I2  J1   J2  L     T  K2e K2d K2c K2b   K2a
K2b1    P  K-M2313 
S   M     P1   NO1
P1c P1b P1a N O
R Q
Footnotes
  1. Van Oven M, Van Geystelen A, Kayser M, Decorte R, Larmuseau HD (2014). "Seeing the wood for the trees: a minimal reference phylogeny for the human Y chromosome". Human Mutation. 35 (2): 187–91. doi:10.1002/humu.22468. PMID 24166809. S2CID 23291764.
  2. International Society of Genetic Genealogy (ISOGG; 2015), Y-DNA Haplogroup Tree 2015. (Access date: 1 February 2015.)
  3. Haplogroup A0-T is also known as A-L1085 (and previously as A0'1'2'3'4).
  4. Haplogroup A1 is also known as A1'2'3'4.
  5. F-Y27277, sometimes known as F2'4, is both the parent clade of F2 and F4 and a child of F-M89.
  6. Haplogroup LT (L298/P326) is also known as Haplogroup K1.
  7. Between 2002 and 2008, Haplogroup T-M184 was known as "Haplogroup K2". That name has since been re-assigned to K-M526, the sibling of Haplogroup LT.
  8. Haplogroup K2b (M1221/P331/PF5911) is also known as Haplogroup MPS.
  9. Haplogroup K2b1 (P397/P399) is also known as Haplogroup MS, but has a broader and more complex internal structure.
  10. Haplogroup P (P295) is also klnown as K2b2.
  11. K-M2313*, which as yet has no phylogenetic name, has been documented in two living individuals, who have ethnic ties to India and South East Asia. In addition, K-Y28299, which appears to be a primary branch of K-M2313, has been found in three living individuals from India. See: Poznik op. cit.; YFull YTree v5.08, 2017, "K-M2335", and; PhyloTree, 2017, "Details of the Y-SNP markers included in the minimal Y tree" (Access date of these pages: 9 December 2017)
  12. Haplogroup S, as of 2017, is also known as K2b1a. (Previously the name Haplogroup S was assigned to K2b1a4.)
  13. Haplogroup M, as of 2017, is also known as K2b1b. (Previously the name Haplogroup M was assigned to K2b1d.)

References

  1. ^ International Society of Genetic Genealogy (ISOGG; 2017), Y-DNA Haplogroup Tree 2017 (24 March 2017).
  2. "Browse Articles | European Journal of Human Genetics". www.nature.com. Retrieved 25 March 2023.
  3. International Society of Genetic Genealogy (ISOGG; 2015), Y-DNA Haplogroup Tree 2015. (Access date: 1 February 2015.)

Footnotes

Works cited

Sources for conversion tables


Further reading

Phylogenetics

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